Pranov,
There is no way to set rights to access a System View but you can control what results they can see within that System View based on Security Roles.
For Example, "Open Opportunities" could show all the open opportunities owned by any user within a particular Business Unit (I.E. Territory) for the manager, but only show the open opportunity that particular user owns for a non-manager user.
If you want to control who can see the actual views, you need to create a personal view and then share it with the manager.